BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B12SP1|AL428176
(1012 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1080 1962 0.0
>3x_Contig1080
Length = 4249
Score = 1962 bits (986), Expect = 0.0
Identities = 1006/1014 (99%), Gaps = 2/1014 (0%)
Strand = Plus / Minus
Query: 1 gatcctgtcatctttwcattggaaagctcggtaacctgaaggagttgtcttcgaacatga 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 gatcctgtcatctttacattggaaagctcggtaacctgaaggagttgtcttcgaacatga 1864
Query: 61 tggttgtgaa-ccaaaaaggtgaaattcgattgcattcaggtaatcttggctggatatta 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 tggttgtgaaaccaaaaaggtgaaattcgattgcattcaggtaatcttggctggatatta 1804
Query: 120 taaggatagcgttccaccttctgggtgttttcacttaaacgtcttagttcgactgaataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 taaggatagcgttccaccttctgggtgttttcacttaaacgtcttagttcgactgaataa 1744
Query: 180 cgttcatctattgagttttgtgaaattgaaagactaaaacctcatcgctaaatcttcgat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 cgttcatctattgagttttgtgaaattgaaagactaaaacctcatcgctaaatcttcgat 1684
Query: 240 ataaaaggacagacgatatagaaattcataagcagcagagaacacaacaacgtaaaatta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 ataaaaggacagacgatatagaaattcataagcagcagagaacacaacaacgtaaaatta 1624
Query: 300 tgaaggttatctagaccccaatactgtcatgaacacatgcggas-gtgctcaatcgagga 358
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1623 tgaaggttatctagaccccaatactgtcatgaacacatgcggagcgtgctcaatcgagga 1564
Query: 359 ggtcacacatctattcaagcaggtggacagaaattaatatacatcggcgatttgatactt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 ggtcacacatctattcaagcaggtggacagaaattaatatacatcggcgatttgatactt 1504
Query: 419 atggtaaaggtcgacatcttatgctacgatcttatagttatctaagaattaccagaagat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 atggtaaaggtcgacatcttatgctacgatcttatagttatctaagaattaccagaagat 1444
Query: 479 acatgacaggtatagggtggaacgaatccgaagttttggtagatagamaatccaagtttc 538
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1443 acatgacaggtatagggtggaacgaatccgaagttttggtagatagaaaatccaagtttc 1384
Query: 539 aagcaaggtgccatgctatcaagaacctgtctgaagttgataagttactggaggtattag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 aagcaaggtgccatgctatcaagaacctgtctgaagttgataagttactggaggtattag 1324
Query: 599 tggaaaamhataaggccgtccaaaaggcaacgcacaagcatatgtatgcatggagaacgg 658
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 tggaaaaaaataaggccgtccaaaaggcaacgcacaagcatatgtatgcatggagaacgg 1264
Query: 659 cagatattataccccccgagcacaataagaaaggaaataagaagaggaaaaggggttcat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 cagatattataccccccgagcacaataagaaaggaaataagaagaggaaaaggggttcat 1204
Query: 719 tgacagtgcctggtgaactgacagggccggcaatgttaaagaatatacaacaaggatcaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 tgacagtgcctggtgaactgacagggccggcaatgttaaagaatatacaacaaggatcaa 1144
Query: 779 atgactgtggtgaggctggtgcaggacaaagacttttaaccttgttagaaagaagtcata 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 atgactgtggtgaggctggtgcaggacaaagacttttaaccttgttagaaagaagtcata 1084
Query: 839 ttgctaatgttttagttgttgttacaagatggtacggtgggacagcattggggcccgcta 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ttgctaatgttttagttgttgttacaagatggtacggtgggacagcattggggcccgcta 1024
Query: 899 gattccgacatatttcaaccacagctgtggaaagcttgaagaaagggaagttcttgcctt 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 gattccgacatatttcaaccacagctgtggaaagcttgaagaaagggaagttcttgcctt 964
Query: 959 aactatattttaaaagtttcctatatgaacctcattctgcaaacgaaaatwtgt 1012
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 963 aactatattttaaaagtttcctatatgaacctcattctgcaaacgaaaatatgt 910
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6416
Number of Sequences: 1807
Number of extensions: 6416
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 1012
length of database: 10,358,551
effective HSP length: 16
effective length of query: 996
effective length of database: 10,329,639
effective search space: 10288320444
effective search space used: 10288320444
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)